BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008A02SP1|AL425786
(766 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig609 370 e-102
>3x_Contig609
Length = 1941
Score = 370 bits (184), Expect = e-102
Identities = 581/717 (81%)
Strand = Plus / Minus
Query: 50 tgatgagatgtgatgtggttatgtggataggggttgtgtatggaaaaaaaaaaaaattgk 109
||||||||||||||| | | ||||||||||| ||||||| |||||||||||||||||
Sbjct: 1165 tgatgagatgtgatgcgctcatgtggataggccttgtgtacggaaaaaaaaaaaaattcc 1106
Query: 110 ttttggtttttggagagatgattttaagtwaaaatgataaaggtgaaatttttgattttt 169
| || || |||| |||||||| | ||||| ||||||||||||||||||||||| | ||||
Sbjct: 1105 tcttcgtctttgcagagatgactctaagtaaaaatgataaaggtgaaatttttcactttt 1046
Query: 170 ttatggaggaattttaagatatatttaaggraaaagaatttgggggtatatataaaggga 229
| ||||| |||||| | |||||||||||| ||||||| || | |||||||||||| ||
Sbjct: 1045 tcatggacgaatttcaccatatatttaaggaaaaagaacttcgccgtatatataaagcga 986
Query: 230 ggaataatttttttgattttatttttttgttttggggttatatttttttgattttttttg 289
|||||||||||| |||| ||| || ||| |||| ||| | | |||||| |||||
Sbjct: 985 cgaataattttttcgattccattcttctgtcttggccttacaccctcttgattccttttg 926
Query: 290 tgtttagtattgtttgtggragttttagttgggtttttttttgagtttattaaagataga 349
||||||||||||||||||| |||||||||||| | ||| | |||| | ||||||||||||
Sbjct: 925 tgtttagtattgtttgtggaagttttagttggatctttctctgagctcattaaagataga 866
Query: 350 ttaataadktattaaktagkttatttatatataatgtttagaaaaggtggtagagaattg 409
||||||| || || || | ||||||||| |||||| ||| ||| || |||| |||||
Sbjct: 865 ttaataacctactacctacctcatttatatacaatgttcagacaagctgctagacaattg 806
Query: 410 attgttaattttggtgttatgattgttaagagaggtatttttttkggtgggagagaattt 469
|||| ||| | | ||||||| | || |||||||| ||| | ||| | || ||| ||| |
Sbjct: 805 attgctaactctcgtgttatcactgctaagagagctatctctttcgctgccagacaatct 746
Query: 470 attgtktttggtttgggttttattgggtttggtttgaagggattggttggtataaggggt 529
| ||| | ||||||| ||| || || |||| || ||| |||||||| || ||||||
Sbjct: 745 actgtctctggtttgcgttctactgcctttgcttccaagccattggttgctaccaggggt 686
Query: 530 attaaggaaatgaattttggtggtgttgaagaaaaggtttaggaaagagntgattgggta 589
|| ||| |||| || ||||||||||||||||||| || || ||||||| ||| ||| |
Sbjct: 685 atcaagcaaatcaactttggtggtgttgaagaaaccgtctacgaaagagctgactggcca 626
Query: 590 atggaaaaattgttgkaatahtttaaggaggaraatttgggtttgattggttaaggttct 649
| |||||||||||| |||| || ||||| || | ||||| |||||||||||| ||||||
Sbjct: 625 accgaaaaattgttgcaatacttcaaggacgacactttggctttgattggttacggttct 566
Query: 650 haaggttacggtaaaggtttgaaattgagagaaaaaggtttgaaagttattgtdggtgtt 709
||||||||||| |||||||||| |||||||| || |||||||| || ||||| |||||
Sbjct: 565 caaggttacggtcaaggtttgaacttgagagacaacggtttgaacgtcattgtcggtgtc 506
Query: 710 agaaagaatggtggtttttggaagggtggrattgaagaaggttgggttctaggtgaa 766
||||||||||||| || |||||||| || |||||||| |||||||| | |||||||
Sbjct: 505 agaaagaatggtgcttcttggaaggctgccattgaagacggttgggtcccaggtgaa 449
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,526
Number of Sequences: 1807
Number of extensions: 16526
Number of successful extensions: 785
Number of sequences better than 1.0e-20: 1
length of query: 766
length of database: 10,358,551
effective HSP length: 16
effective length of query: 750
effective length of database: 10,329,639
effective search space: 7747229250
effective search space used: 7747229250
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.1 bits)